#n ARGOS install.conf  -- default configuration 
#n This format is key=value usable from perl, shell, java programs
#n Due to complexity of configuration management, some keys are duplicated below

## installargos.pl uses this for -reconfigure
## NOTE: some of these are needed from run-apache / run-tomcat as ENV values

## use new ROOT/bin/argos-env instead of adding exports here...
## FIXME: "Dang it - ROOT in .local doesnt replace below $ROOT values"

#n Path to installation ; 
#n original reference path is /bio/biodb; using this may make reconfiguration easiest
## ROOT=/bio/argos
ARGOS_ROOT=/bio/argos

#n packages to install
PACKAGES="argos-root flybase"
#PACKAGES="argos-root centaurbase"

#n Which tomcat-servers to start (config in 'service'/conf/tomcat-server.xml)
#n all now would be "centaurbase eugenes daphnia flybase gmod"
TOMCAT_SERVERS="flybase"

#n Which apache servers to start (config in ROOT/conf/'service'.conf)
#n apache is default; FlyBase.net uses two: flybase-80 and flybase-8081
APACHE_SERVERS="apache"

#n Which postgres servers to start - not yet enabled
POSTGRES_SERVERS=

## feb04; changed service key naming  to consistent ORGANISM_SERVICE  

#n Includes for ROOT/conf/apache.conf - commented out directives by default
#n To enable a web service, edit out the '#XXX_CONF' part
FLYBASE_CONF=#FLYBASE_CONF
EUGENES_CONF=#EUGENES_CONF
DAPHNIA_CONF=#DAPHNIA_CONF
CENTAURBASE_CONF=#CENTAURBASE_CONF
GMOD_CONF=#GMOD_CONF

#n network port numbers and settings for each service
#n ROOT/main web server port (was APACHE_PORT)
ARGOS_APACHE=8081

# #n servlet server port (admin) ; dropped - run a tomcat server for each service
# TOMCAT_PORT=7880

#n postgresql server port (was PGPORT)
ARGOS_POSTGRES=7302

#n Following service configurations need changing only for user-selected services
#n install.cgi should auto-generate from those + portnum range
#n 

#n FlyBase host ports  and settings
# FLYBASE_PORT=7082 ; TOMCAT_FLYBASE=7882
FLYBASE_APACHE=7082
FLYBASE_TOMCAT=7883
FLYBASE_URI=flybase
## unused#FLYBASE_HTTPS=7885
## later?#FLYBASE_PGDATA=/bio/argos/flybase/indices/pgsql

#n euGenes host ports and settings
# EUGENES_PORT=7072 ; TOMCAT_EUGENES=7872
EUGENES_APACHE=7072
EUGENES_TOMCAT=7073
EUGENES_URI=eugenes
## unused#EUGENES_HTTPS=7075
## later?#EUGENES_PGDATA=/bio/argos/eugenes/indices/pgsql

# #n daphnia host ports and settings
# DAPHNIA_APACHE=7182
# DAPHNIA_TOMCAT=7183
# DAPHNIA_HTTPS=7185
# DAPHNIA_URI=daphnia
# #later?#DAPHNIA_PGDATA=/bio/argos/daphnia/indices/pgsql

#n Centaurbase host ports and settings
# CENTAURBASE_PORT=7112; TOMCAT_CENTAURBASE=7113
CENTAURBASE_APACHE=7112
CENTAURBASE_TOMCAT=7113
CENTAURBASE_HTTPS=7115
CENTAURBASE_URI=centaurbase
##later?#CENTAURBASE_PGDATA=/bio/argos/centaurbase/indices/pgsql

#n GMOD host ports and settings
GMOD_APACHE=7122
## later?#GMOD_TOMCAT=7123
GMOD_URI=gmod
## unused as yet#GMOD_HTTPS=7125
## later?#GMOD_PGDATA=/bio/argos/gmod/indices/pgsql

# #n template host ports and settings
# TEMPLATE_APACHE=7122
# TEMPLATE_TOMCAT=7123
# TEMPLATE_HTTPS=7125
# TEMPLATE_URI=template
##? TEMPLATE_PGDATA=/bio/argos/template/indices/pgsql


#n ========================================================
#n These are system settings you can generally leave as is

#n path to Java 1.3 (or later) -- this may need checking 
## can installer check/set this? ditto for perl path, rsync path
JAVA_HOME=/usr/java

#n shared library path needed by servers (DYLD_LIBRARY_PATH on MacOSX)
LD_LIBRARY_PATH=/bio/argos/common/system-local/lib
DYLD_LIBRARY_PATH=/bio/argos/common/system-local/lib

#n PostgresDB main data storage
PGDATA=/bio/argos/ROOT/indices/pgsql

##later# path to Perl v5.6  (or later) -- this may need checking 
## can installer check/set this? ditto for perl path, rsync path
# PERL_HOME=/usr/bin/perl

#n PERL library path 
PERL5LIB="/bio/argos/common/perl/lib:/bio/argos/common/system-local/perl/lib"